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Deployed collars are exposed to environmental and biohazardous conditions, and are not always recovered in the best of conditions. Yet, they often must be handled for the purposes of data collection and refurbishment.

A common solution emerges for disinfecting equipment potentially exposed to animal-borne diseases.
| Disease | Cleaning Protocol | Reference |
| Foot-and-mouth disease | Sodium hypochlorite 3% (for 30 minutes) |
https://www.woah.org/app/uploads/2021/09/202501-fmd-diseasecard.pdf |
| Avian Influenza H5N1 | Sodium hypochlorite | https://pubmed.ncbi.nlm.nih.gov/14575118/ |
| Blue-tongue | Sodium hypochlorite 3% | https://www.cfsph.iastate.edu/Factsheets/pdfs/bluetongue.pdf |
| Chronic Wasting Disease | Sodium hypochlorite 40% (for 5 minutes) |
https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0223659 |
Bleach options available.


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